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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004005
species:
Oryza sativa
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATGGGACTGAGGGAGTACTA
miRNA*
GTACTCCCTCCGTCCCATAAT
mismatches:
1
bulges:
0
View larger
pre-miRNA
GTA
GTACTCCCTCCGTCCCATAAT
ATAAGGGATTTTGGACAGATGTGAGACGTCCAGATTCATTGTATTAGGATGTGTCACATCTACCCATAATCCCTTG
TAT
TATGGGACTGAGGGAGTACTA
dot-bracket secondary structure
.((
((((((((((.((((((((((
((((((((((.(((..((((((((.((((((.(((.......))).)))))).))))))))..))).)))))))))
)))
)))))))).))))))))))))
SIMILARITIES
miRBase
osa-MIR1442
:
0.00000000000003
PMRD
osa-miR1442
:
0.00000000000003
microPC
miR1436
:
0.000002
UniProt
no hits
RFAM
MIR1122: 6e-65
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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