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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004012
species:
Oryza sativa
miRNA family:
MIRf528
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGATTCGTAGTACTAGGATG
miRNA*
TTATAGTACAACGAATCTGGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
CCAAAAAGTGAATCTAGCTCTGTATGTGACACA
TTATAGTACAACGAATCTGGA
TAGAAATATGTC
TAGATTCGTAGTACTAGGATG
TGTCGCATCGAGT
GTTGGTTTTTTATGGGA
dot-bracket secondary structure
(((.(((..(((((..((((...((((((((((
((.((((((.(((((((((((
((......))))
))))))))).)))))).))))
)))))))).))))
...)))))))).)))..
SIMILARITIES
miRBase
osa-MIR814c
:
0.000006
PMRD
osa-miRf10473-akr
:
0.00000009
microPC
miR1436
:
2e-52
UniProt
no hits
RFAM
MIR1122: 2e-21
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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