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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004328
species:
Oryza sativa
miRNA family:
MIRf75
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGCGAGACGAATCTTTTGAGT
miRNA*
TTAAAAGATTCGTCTCGTGGT
mismatches:
0
bulges:
0
View larger
pre-miRNA
TATAAAT
CGCGAGACGAATCTTTTGAGT
CTAATTAGGCCATGATTAACTATAAGTGCTACAATAACTTACATGTGCTAATGACAGATTGATTAGGC
TTAA
AAGATTCGTCTCGTGGT
TTTA
dot-bracket secondary structure
...((((
(((((((((((((((((((((
((((((((..(((.....((..(((((.........)))))...))....))).....))))))))))
))))
)))))))))))))))))
))..
SIMILARITIES
miRBase
osa-MIR445h
:
0.00000000003
PMRD
osa-miRf11785-akr
:
1e-28
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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