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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST003820
species:
Oryza sativa
miRNA family:
MIR446
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATCAATATGAATGTGGGAGA
miRNA*
TTCCACATTTATATTGATTCA
mismatches:
1
bulges:
0
View larger
pre-miRNA
GGTTAATTAATTAGTACTCCTTCCGTTTCACAATGTAAGTCATTATAGCATT
TTCCACATTTATATTGATTCA
TTAA
CATCAATATGAATGTGGGAGA
TG
CTAGAATNACTTACATTGTAAAACGAAGTAAGTACTCCTGTACATAC
dot-bracket secondary structure
............((((((.((((.((((.(((((((((((.(((.(((((((
((((((((((((((((((...
....
.))))))))))))))))))))
))
))).))).))))))))))).))))))))..))))))...........
SIMILARITIES
miRBase
osa-MIR809d
:
3e-20
PMRD
osa-miR809d
:
3e-20
microPC
miR809
:
0.00000000003
UniProt
no hits
RFAM
MIR1122: 3e-36
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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