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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST045342
species:
Oryza sativa
source:
microPC, original name:
miR809
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAATATGGGAAATGTTAGAAT
miRNA*
TCTGGCATTTCTCATATTCATA
mismatches:
0
bulges:
0
View larger
pre-miRNA
AT
TCTGGCATTTCTCATATTCATA
TTGATGCTAACGAATCTAGACATATATATCCATCTAGATTCATTAACATTAATA
TGAATATGGGAAATGTTAGAAT
dot-bracket secondary structure
((
((((((((((((((((((((((
((((((.(((.(((((((((............))))))))).))).))))))))
))))))))))))))))))))))
SIMILARITIES
miRBase
osa-MIR808
:
2e-26
PMRD
osa-miR808
:
2e-26
microPC
miR808
:
8e-51
UniProt
no hits
RFAM
MIR1122: 7e-27
Identical with:
miR808
from microPC (
MNEST046758
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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