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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST045355
species:
Oryza sativa
source:
microPC, original name:
miR167
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCT
miRNA*
GTCATGCTGTAGTTTCA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TGAAGCTGCCAGCATGATCT
GATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAG
GTCATGCTGTAGTTTCA
dot-bracket secondary structure
.((((((((.((((((((((
(((..((((..((((((.......(((..........)))........)))))))))))))))
)))))))))))))))).
SIMILARITIES
miRBase
osa-MIR167h
:
4e-31
PMRD
osa-miR167m
:
4e-31
microPC
miR167
:
4e-31
UniProt
no hits
RFAM
MIR167_1: 7e-30
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record
deep sequencing data evidence