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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004572
species:
Oryza sativa
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGACTTACATTGTGAAACGG
miRNA*
GTTTCACAATGTAAGTCATTC
mismatches:
0
bulges:
0
View larger
pre-miRNA
AAGTACTCCCTCC
GTTTCACAATGTAAGTCATTC
TAGCATTTCCCACATTCATATTGATGCTAATGAATCTATATAAATATAGA
ATGACTTACATTGTGA
AACGG
GAGGAAGTAA
dot-bracket secondary structure
...((((.(((((
(((((((((((((((((((((
((...........((((((..........))))))...........))))
))))))))))))))))
))).)
)))).)))).
SIMILARITIES
miRBase
osa-MIR809d
:
1e-31
PMRD
osa-miR809d
:
1e-31
microPC
miR809
:
0.000000000002
UniProt
sp|Q6K1U0|P2C17_ORYSJ: 0.001
RFAM
MIR1122: 6e-31
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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