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Species belonging to selected taxon:
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST008495
species:
Sorghum bicolor
miRNA family:
MIRf1158
source:
miRNEST
Taxonomy by NCBI:
Sorghum bicolor
Sorghum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCATTTGGAACGTGTAATTTT
miRNA*
AATTCCTACGTTCCAAACGGGT
mismatches:
2
bulges:
1
View larger
pre-miRNA
ACATGAAGGCT
CCATTTGGAACGTGTAATTTT
TTTTGTTCCTGTGTTGTTTCTACAAAAAATAAAATAAATCCTAAAAAAACTATGGAATTCCAGTGA
AA
TTCCTACGTTCCAAACGGGT
CCAAATAT
dot-bracket secondary structure
.......((.(
((.(((((((((((.((((((
.((.(((((...(((.(((........................))).)))...)))))...)).))
))
))..))))))))))).))).
))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record