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Species belonging to selected taxon:
Panicum virgatum
ABOUT THIS RECORD
ID:
MNEST001753
species:
Panicum virgatum
miRNA family:
MIRf75
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CACGAGACGAATCTTTTGAGG
miRNA*
TCAAAAGATTCGTCTCGTCGT
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTTCAGAATTTACTTGGAAAC
CACGAGACGAATCTTTTGAGG
CCTTTGACCGCATCATTATCACATGTGGGTTATTGTAGCACTTATAGCTAATCATGCA
CTAATTAGGC
TCAAAAGATTCGTCTCGTCGT
GTACATCCAAACTGCGTA
dot-bracket secondary structure
.............(((((.((
.(((((((((((((((((((.
(((......((((.((((.....(((((((.........)))))))..)))).)))).
......))))
)))))))))))))))))).))
.....)))))........
SIMILARITIES
miRBase
osa-MIR2124a
:
0.0000001
PMRD
osa-miRf10240-akr
:
6e-22
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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