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Species belonging to selected taxon:
Panicum virgatum
ABOUT THIS RECORD
ID:
MNEST001836
species:
Panicum virgatum
miRNA family:
MIR444
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCAGTTGTTGCCTCAAGCTT
miRNA*
GCATGAGGCAGGAACTGCATT
mismatches:
2
bulges:
0
View larger
pre-miRNA
GGTGGCACCAA
GCATGAGGCAGGAACTGCATT
ACTTGCAAGAAAGTCACAAAATCCATTGCAAGATCATACTTGTGGCTTTCATGCAAGTTG
TGCAGTTG
TTGCCTCAAGCTT
GCTGCCTC
dot-bracket secondary structure
...((((.(((
((.((((((((.((((((((.
(((((((.(((((((((((.....(((....))).....))))))))))).))))))).)
))))))).
)))))))).))))
).))))..
SIMILARITIES
miRBase
ssp-MIR444b
:
3e-48
PMRD
osa-miR444f
:
4e-16
microPC
miR444
:
6e-40
UniProt
no hits
RFAM
MIR444: 2e-46
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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