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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST003438
species: Glycine max
miRNA family: miR162
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGGCAGCGGTTCATCGAT

miRNA*
 CGATAAACCTCTGCATCCAGC

mismatches: 3
bulges: 0
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pre-miRNA
 AATTTTAATTTTGGAGGTGTATCGAGATGAGGTGAAGTCACTGGAGGCAGCGGTTCATCGATCTCTTCCTGAATTTGGTTGTGGAAGAACACAAAGCAAG
AATCGGTCGATAAACCTCTGCATCCAGCGCTCACTTTGCCTCTCTTTACCAGCAATTTCCTTTCTC

dot-bracket secondary structure
............((((.(((...((((.((((((((((..(((((.((((.((((.(((((((..(((.((.......(((((......)))))..)).)
))..))))))).)))).)))).))))).....)))))))))))))).....)))..))))......


SIMILARITIES
miRBase vvi-MIR162: 7e-25

PMRD vvi-miR162: 7e-25

microPC miR162: 1e-41		UniProt no hits

RFAM MIR162_2: 3e-18		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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