miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris

ABOUT THIS RECORD

ID: MNEST045754
species: Glycine max
source: microPC, original name: miR828

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TCTTTCTCAAATAAGTATTCCA

miRNA*
GAATGTTGTTATGACCAGGAAG

mismatches: 3
bulges: 2

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pre-miRNA
GGAATGTTGTTATGACCAGGAAGGTTGTTATAGTTGTGGTTTTGCTCTACCTTCTTTCTCAAATAAGTATTCCA

dot-bracket secondary structure
(((((((((((.(((..((((((((.((...............))...))))))))..)))))))).)))))).

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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