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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Glycine soja
,
Glycyrrhiza uralensis
,
Lotus japonicus
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Trifolium pratense
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST040643
species:
Glycine soja
miRNA family:
MIR3522
source:
miRBase, original name:
gso-MIR3522a
(
MI0015365
)
Taxonomy by NCBI:
Glycine soja
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGACCAAATGAGCAGCTGA
miRNA*
AGCTGCTCATCTGTTCTCAGG
mismatches:
2
bulges:
0
View larger
pre-miRNA
ACAGGATCGTCC
TGAGACCAAATGAGCAGCTGA
CCACATGATGCAGCTATGTTTGCTATTC
AGCTGCTCATCTGTTCTCAGG
TCGCCCTTGT
dot-bracket secondary structure
(((((..((.((
(((((.((.((((((((((((
...((....(((....))).))....))
)))))))))).)).)))))))
.))..)))))
SIMILARITIES
miRBase
gso-MIR3522b
:
3e-47
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
gso-MIR3522b
from miRBase (
MNEST040644
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned, Northern
references
[
1
] Chen R, Hu Z, Zhang H,
J Integr Plant Biol. 51:1071-1079(2009).
,
"Identification of microRNAs in wild soybean (Glycine soja)"