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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Glycine soja
,
Glycyrrhiza uralensis
,
Lotus japonicus
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Trifolium pratense
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST008390
species:
Medicago truncatula
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATACTCCCTCCGTCCCAAAT
miRNA*
TTAGGACGGAGGGAGTAAGTG
mismatches:
3
bulges:
0
View larger
pre-miRNA
ATTAAGAA
AATACTCCCTCCGTCCCAAAT
TGTATGACGTTTTGGGCATTTCACACGTATTAAGAAATGTAATTAATATTGTGTGGGAAAAAGATATTATG
AGTTGTTTTACAAAATTATCCTCAATAAATGATATGGGAAAGATAAATGAAGGAATTGAAAGAAGATAGAGTAATAAATAGTTAAGAATATAATATGAAA
AGTAACATTAATTTTTCATTGATATTGTAAAGCGATTTATAATTTGGGACAAATATTTTTTTTAAAATGACATACAAT
TTAGGACGGAGGGAGTAAGTG
G
CATG
dot-bracket secondary structure
........
..((((((((((((((.((((
((((((.(((((((((..(((((((((((((((.........)))))).))))))))).((((((((((((
(((((((((((((.((((((((((.......................)).)))).((....))..(((...((((.....))))....)))...((((((
(((.......))))))))))))).))))))))))))))))))((((...)))))))))))))))))))).))))))))
)).))))))))))))))....
.
....
SIMILARITIES
miRBase
tae-MIR1122
:
0.0002
PMRD
tae-miR1122
:
0.0002
microPC
miR1439
:
0.001
UniProt
no hits
RFAM
MIR1122: 0.00002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record