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Species belonging to selected taxon:

Gadus morhua



ABOUT THIS RECORD

ID: MNEST007421
species: Gadus morhua
miRNA family: mir-207
source: miRNEST

Taxonomy by NCBI:
Gadus morhua Gadus Gadidae Gadiformes Paracanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTCGGCTGGCTCTCCTCCCT

miRNA*
GGGTGAAGCGTCTGAGGGG

mismatches: 3
bulges: 2

View larger
pre-miRNA
CATTTCTGGAAAGACAAAAAGGCGAGGGAAAGGGGTGAAGCGTCTGAGGGGGACCCCGGCTGCTATGAGTGGGAGTTTACCCACGGTGAGTCTAGACCTG
CGTTCAGAATATTGTGCCAGTTGTAGGCTTTTATTTATTTAAACATTTTAAACTCCTTCGGCTGGCTCTCCTCCCTGAGTCCTTCAGTCCAGGTATAGTC
CGGCG


dot-bracket secondary structure
.....(((((...((.....(((((((((.(((((.(((((..(((((((((............((((((((((((((((.(((((((..(((.(((...
.))).))).)))))))......))))))))))))))))..............)))))))))...))).)).)))))...)))))).)))...))....))
)))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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