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Species belonging to selected taxon:

Taeniopygia guttata, Lonchura striata domestica



ABOUT THIS RECORD

ID: MNEST008803
species: Taeniopygia guttata
miRNA family: miR-1682
source: miRNEST

Taxonomy by NCBI:
Taeniopygia guttata Taeniopygia Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGGTGAGATGGAGCTGATGG

miRNA*
GTCAAGCTCATTTCACTCCCT

mismatches: 1
bulges: 2

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pre-miRNA
ACTTATTGGCCTGGGTGAGATGGAGCTGATGGGGGCCAAAGCCCGACACTGACCATTCTTTAATAGACAAAGAAATCGTAGCCCAAACCGGGCTCTGTTA
CACCACGTCTCCCCGTCAAGCTCATTTCACTCCCTAAATCTGT


dot-bracket secondary structure
.....((((...((((((((((.((((((((((((.((.((((((...(((....((((((.......))))))....))).......)))))).))..(
(.....)).)))))))).)))))))))))))).))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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