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Species belonging to selected taxon:

Paullinia cupana var. sorbilis



ABOUT THIS RECORD

ID: MNEST001889
species: Paullinia cupana var. sorbilis
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Paullinia cupana var. sorbilis Paullinia cupana Paullinia Sapindaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA

miRNA*
ATGAAGAGTGGCAATGAAG

mismatches: 4
bulges: 2

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pre-miRNA
GAGTAATCTGTACATGCCTCAACTATCTTAATCATCATCATCATCATCATCAACATCATCATCATCATGGTTATAATAAGTGTAGTTTCCATGGTTCTAT
CCTTCCTAGTCACAAACTGGTGACGAAGATGATGAAGATGAAGAGTGGCAATGAAGAGGTACTTAGGAGGGCCTTGTG


dot-bracket secondary structure
((....))..((((.((((...(((.(((..((((..((((..((.(((((....((((((((.((((((..((.((....)).))..)))))).....(
(.((.(((((.....))))).)).)).)))))))).))))).))))))..))))..)))....)))..))))..))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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