miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Oreochromis niloticus, Sparus aurata, Dicentrarchus labrax, Dissostichus mawsoni, Perca flavescens, Paralabidochromis chilotes, Lates calcarifer, Thunnus thynnus



ABOUT THIS RECORD

ID: MNEST009105
species: Dicentrarchus labrax
miRNA family: mir-187
source: miRNEST

Taxonomy by NCBI:
Dicentrarchus labrax Dicentrarchus Moronidae Percoidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGTGTCTTGTGTTGCAGCC

miRNA*
CTGCAACACAGGACATGGGT

mismatches: 0
bulges: 0

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pre-miRNA
TGACCTGTTGGCTGGGCCAGGGGCTGCAACACAGGACATGGGTCCTGCTTCTCCTCCCCGCTCGTGTCTTGTGTTGCAGCCAGTGGAGCTGCCTGTCTTC
C


dot-bracket secondary structure
.(((.....(((....(((..((((((((((((((((((((((................))))))))))))))))))))))..)))....))).)))...
.



SIMILARITIES
miRBase fru-mir-187: 4e-28

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-187: 1e-37
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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