miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Oreochromis niloticus, Sparus aurata, Dicentrarchus labrax, Dissostichus mawsoni, Perca flavescens, Paralabidochromis chilotes, Lates calcarifer, Thunnus thynnus



ABOUT THIS RECORD

ID: MNEST009109
species: Dicentrarchus labrax
miRNA family: let-7
source: miRNEST

Taxonomy by NCBI:
Dicentrarchus labrax Dicentrarchus Moronidae Percoidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATAGT

miRNA*
TATACAGTCTATTGCCTTCCC

mismatches: 1
bulges: 0

View larger
pre-miRNA
TTGATTTGGACTCTGTCAGGGTGAGGTAGTAGGTTGTATAGTTTGGTGGGTGGGATTGCACCCTGCTCAGGTGATAACTATACAGTCTATTGCCTTCCCT
GAGGAGCTCACTGAACA


dot-bracket secondary structure
......(((.((((.((((((.(((((((((((((((((((((...((((((((.......))))))))......)))))))))))))))))))))))))
)))))).))).......



SIMILARITIES
miRBase dre-let-7a-5: 2e-27

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 9e-33
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;