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Species belonging to selected taxon:
Oreochromis niloticus
,
Sparus aurata
,
Dicentrarchus labrax
,
Dissostichus mawsoni
,
Perca flavescens
,
Paralabidochromis chilotes
,
Lates calcarifer
,
Thunnus thynnus
ABOUT THIS RECORD
ID:
MNEST009110
species:
Dicentrarchus labrax
miRNA family:
miR-199a
source:
miRNEST
Taxonomy by NCBI:
Dicentrarchus labrax
Dicentrarchus
Moronidae
Percoidei
Perciformes
Percomorpha
Euacanthopterygii
Acanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGTAGTCTGCACATTGGTTA
miRNA*
CCCAGTGTTCAGACTACCTGTT
mismatches:
2
bulges:
1
View larger
pre-miRNA
TCCTCACCCCCCCGCCTG
CCCAGTGTTCAGACTACCTGTT
CATCAGGCTACAGCTGAA
CAGTAGTCTGCACATTGGTTA
GGCTGGGCTGGGACGCAC
dot-bracket secondary structure
......((((((.(((((
.(((((((.((((((((.((((
(....(((....))))))
)))))))))).))))))).))
))).)))..)))......
SIMILARITIES
miRBase
dre-mir-199-3
:
6e-33
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-199: 2e-36
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record