miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Oreochromis niloticus, Sparus aurata, Dicentrarchus labrax, Dissostichus mawsoni, Perca flavescens, Paralabidochromis chilotes, Lates calcarifer, Thunnus thynnus



ABOUT THIS RECORD

ID: MNEST009024
species: Sparus aurata
miRNA family: miR-2729
source: miRNEST

Taxonomy by NCBI:
Sparus aurata Sparus Sparidae Percoidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTTTATGAGATCGGTCCTTC

miRNA*
AGGACGAATTTATGAACAAA

mismatches: 4
bulges: 1

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pre-miRNA
GAGGACGAATTTATGAACAAAAAGATAGTTACGTGAGCCTTACTACTGCAGTGACTGCAAAGGAAAGCTGAAAACATTCCTATGCAATTTTATGAGATCG
GTCCTTC
TCTCGCCACC


dot-bracket secondary structure
((((((((.((((((((((......((((...((((...)))).))))...))..((((.(((((...........))))).))))..)))))))).)).
)))))).
..........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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