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Species belonging to selected taxon:

Petromyzon marinus



ABOUT THIS RECORD

ID: MNEST008687
species: Petromyzon marinus
miRNA family: miR-1175
source: miRNEST

Taxonomy by NCBI:
Petromyzon marinus Petromyzon Petromyzontidae Petromyzontiformes Hyperoartia Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGGATTCTCCTTCTCCGACG

miRNA*
TCCGAGAATGGGCCCTTCCACG

mismatches: 4
bulges: 1

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pre-miRNA
GACGGTTTCCTGTCCGAGAATGGGCCCTTCCACGTGAACAATGACGGGCGGACTCTGTACTACAACAACGACAGTTGGAACCAGGTGGCCAACATCCTGT
ACCTCGAGTCTCCCGCTGGCGTGGGATTCTCCTTCTCCGACGACAAGAACT


dot-bracket secondary structure
...(((((..((((.(((((.(((...((((((((...((....((((.((((((.((((.........((..(((((.((...))..))))).))..))
))...)))))))))).))))))))))..))).))))).))))....)))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P10619|PPGB_HUMAN: 0.00000000000008

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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