miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Petromyzon marinus



ABOUT THIS RECORD

ID: MNEST008702
species: Petromyzon marinus
miRNA family: mir-9
source: miRNEST

Taxonomy by NCBI:
Petromyzon marinus Petromyzon Petromyzontidae Petromyzontiformes Hyperoartia Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTTGGTTATCTAGCTGTAT

miRNA*
AAAGCTAGATAACCGAAAGTA

mismatches: 2
bulges: 0

View larger
pre-miRNA
GTAGGTGGTATCTTTGGTTATCTAGCTGTATGAGTGTGTCTGGCCGTCATAAAGCTAGATAACCGAAAGTACCAACGA

dot-bracket secondary structure
.....((((((.(((((((((((((((.(((((..((.....))..))))).))))))))))))))).))))))....


SIMILARITIES
miRBase pma-mir-9a-2: 5e-39

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-9: 5e-18
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;