miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST003432
species: Glycine max
miRNA family: MIR399
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGCTGCCCTG

miRNA*
GGGCATGTCTCTTTTGGCAGG

mismatches: 2
bulges: 0

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pre-miRNA
GTAAGTAAGCAAATCATTCATAGGGCATGTCTCTTTTGGCAGGTAATGGTGATTACTTTGGATTAATTCAGAGCTACCAAAATATGTCTCATAAATAGTA
ATCAACTTGCCAAAGGAGAGCTGCCCTGTGAGTGTTTGACTTAAACA


dot-bracket secondary structure
((...((((((((.(((((((((((((..(((((((((((((((.....((((((((.(((((..(((............)))..))).)).....))))
)))))))))))))))))))..))))))))))))))))).)))).)).



SIMILARITIES
miRBase mtr-MIR399b: 0.0000000000005

PMRD mtr-miR399b: 0.0000000000005

microPC miR399: 0.0001
UniProt no hits

RFAM mir-399: 0.0000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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