miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001901
species: Phaseolus acutifolius
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTCTTCCTCTTCCTCTTTCT

miRNA*
GAAGAGGAAGAAGAAGAAGAA

mismatches: 4
bulges: 0

View larger
pre-miRNA
CTCCTTTTCAGGCTCTTCCTCTTCCTCTTTCTTTTCTTCCTCCTCTTCATCCTCTTCTGGAGGATCTGCAGGCATTGGAGGCGGCAAAGGTGCCTTCATA
GGACTAAATTGAGGGAATATATCTGGTCTTCGTCCAGGCTTAGGCCTTTCCCACTCGATTGGGAAATCGAGAGGGGAACGGCGAGTCATCTTTTCCTCAT
CGGGAGCCATGCGTACGAGGTGCCTCCGAAGGCGTGGAAGTGGAGTGAGAGCGCGAAAGCCAACGATGAAAGGTGATGCAAAGTGAGAAGAAGAAGAAAG
CGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGATGAAGG


dot-bracket secondary structure
.((.(((((....(((((.(((((((((((.((((((((.((.(((((.((.((((((........(((.(((.(((((((.(((..(((((((((((..
.........))))))....))))).))).)).))))))))...(((.(((((.(((((((....)))))))..))))).)))..((((((((....((((
((...((..(((((.((...(((.((((......)))).)))...))...)))))...))...)))))))))))))))))........)))))).))...
.))))).)).)))))))).))))))))))).))))).))))).))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;