miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Glycine soja
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Cajanus cajan
,
Glycine max
,
Vigna unguiculata
,
Phaseolus vulgaris
ABOUT THIS RECORD
ID:
MNEST007543
species:
Vigna unguiculata
miRNA family:
MIRf592
source:
miRNEST
Taxonomy by NCBI:
Vigna unguiculata
Vigna
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGCAAGTTGTTCTTGGCTACA
miRNA*
CATCCAAGGATGACTTGCCGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
CTCAACTCACAACAAGAGGCAGAAAGTAGAGTG
CATCCAAGGATGACTTGCCGG
CAGTTATGTGTTTACTCTCTCTTCGTCGTCGTTTTTTTCGTCGGCC
GGCAAGTTGTTCTTGGCTACA
TTTTGCTCTCTTCTTCTGCTGTGATGCTTT
dot-bracket secondary structure
......(((((...(((((.(((.(((((((((
...((((((((((((((((((
(..........................................)))
))))))))))))))))...))
))))))).))).)))))..)))))......
SIMILARITIES
miRBase
vvi-MIR169s
:
0.00000003
PMRD
vvi-miR169s
:
0.00000003
microPC
miR169
:
2e-27
UniProt
no hits
RFAM
MIR169_2: 0.000000002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record