ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: mir-181
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACATTCATTGCTGTCGGTGG miRNA* ACTGAACAATGAATGCAAC mismatches: 3 bulges: 2 |
pre-miRNA
AAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTTAACTATGTGGACAAGCTCACTGAACAATGAATGCAACTGTGGCCCCA
dot-bracket secondary structure
...(((((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTTAACTATGTGGACAAGCTCACTGAACAATGAATGCAACTGTGGCCCCA
dot-bracket secondary structure
...(((((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))))))...
SIMILARITIES| miRBase gga-mir-181b-1: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 0.0000000003 | most similar mature miRNAs |
Identical with: gga-mir-181b-1 from miRBase (MNEST025976) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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