miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gallus gallus, Meleagris gallopavo



ABOUT THIS RECORD

ID: MNEST006806
species: Gallus gallus
miRNA family: mir-22
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGTTCTTCAGTGGCAAGCTTT

miRNA*
AGCTGCCAGTTGAAGAACTGT

mismatches: 0
bulges: 2

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pre-miRNA
TGCCCGGCAGCAGTTCTTCAGTGGCAAGCTTTATGTCCTTCTCTAGTAGCTAAAGCTGCCAGTTGAAGAACTGTTGAATGTA

dot-bracket secondary structure
....((.(((((((((((((((((((.((((((.((............))))))))))))).))))))))))))))..))..


SIMILARITIES
miRBase gga-mir-22: 2e-41

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-22: 4e-40
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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