ABOUT THIS RECORDspecies: Phlebotomus papatasi
miRNA family: mir-1260
source: miRNEST
Taxonomy by NCBI:
Phlebotomus papatasi Phlebotomus Phlebotomus Phlebotominae Psychodidae Psychodoidea Psychodomorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTCCACCACTTCCACCATCG miRNA* TCGTGGAAGTGGCTGGAGCTC mismatches: 3 bulges: 2 |
pre-miRNA
TCAAGTTGGAAATTCCACCACTTCCACCATCGAATTTGGACAATTGTGGCATCATTGATGTTGATTACGATCTCAAGATTGTCGTGGAAGTGGCTGGAGC
TCATAGAAAT
dot-bracket secondary structure
......(((...(((((((((((((((...(((.(((((...(((((((((((...)))))....)))))).))))).)))..)))))))))).))))).
))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCAAGTTGGAAATTCCACCACTTCCACCATCGAATTTGGACAATTGTGGCATCATTGATGTTGATTACGATCTCAAGATTGTCGTGGAAGTGGCTGGAGC
TCATAGAAAT
dot-bracket secondary structure
......(((...(((((((((((((((...(((.(((((...(((((((((((...)))))....)))))).))))).)))..)))))))))).))))).
))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
