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Species belonging to selected taxon:

Daphnia pulex, Daphnia magna



ABOUT THIS RECORD

ID: MNEST008595
species: Daphnia pulex
miRNA family: mir-263
source: miRNEST

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGCACTGGAAGAATTCAC

miRNA*
GGGTTCCCTGGTGCCAGAG

mismatches: 1
bulges: 1

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pre-miRNA
TTCCGGTGATCCTTGGCACTGGAAGAATTCACAGAGTGCATTACGACAGGTCGTGGGTTCCCTGGTGCCAGAGATTGCTCCC

dot-bracket secondary structure
....(((((((.((((((((((..((((((((....................)))))))).)))))))))).)))))))...


SIMILARITIES
miRBase dpu-mir-263b: 5e-36

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-263: 0.000004
most similar mature miRNAs

Identical with: dpu-mir-263b from miRBase (MNEST035020)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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