miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Physcomitrella patens
ABOUT THIS RECORD
ID:
MNEST007000
species:
Physcomitrella patens
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Physcomitrella patens
Physcomitrella
Funariaceae
Funariales
Funariidae
Bryopsida
Moss Superclass V
Bryophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCCTCA
miRNA*
AGGATGATGAAGATGATGAGC
mismatches:
1
bulges:
0
View larger
pre-miRNA
CGTG
AGGATGATGAAGATGATGAGC
AAGAAGCCAGATTCCATTATCAAAGCTTGCGGCACCACCATCACCACCC
TCATCATCATCATCATCCTCA
G
dot-bracket secondary structure
..((
((((((((((.(((((((((.
...((((..(((......)))...))))..((...........))...)
)))))))).))))))))))))
.
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-598: 3e-35
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
download this record