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Species belonging to selected taxon:

Physcomitrella patens



ABOUT THIS RECORD

ID: MNEST007001
species: Physcomitrella patens
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Physcomitrella patens Physcomitrella Funariaceae Funariales Funariidae Bryopsida Moss Superclass V Bryophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGAGATCTCCGA

miRNA*
GAGTTTTTTTTTATCTTTTA

mismatches: 4
bulges: 1

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pre-miRNA
GTGCGCAATTTTTGGATTGAAGAGATCTCCGAGCGGTGGTGTGTGTGCATGTTGCGATTCGTTTGAGTTTTTTTTTATCTTTTAACCTGAAC

dot-bracket secondary structure
.............((((.(((((((.(((.((((((.........((((...))))..))))))))).))))))).))))............


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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