miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis



ABOUT THIS RECORD

ID: MNEST001943
species: Picea glauca
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCTTCCTCTTCCTCCTCCG

miRNA*
GAGGAGGAGAAGAAGAAAGG

mismatches: 4
bulges: 1

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pre-miRNA
CCAACAAAGAAGGAGGAGGAGAAGAAGAAAGGATTTTGAGCTACAATGACAAAATGGGTATTCAAAACCAACAGCTTATTCAGACAGACCAGAGATCCAG
AAATGGAGGCGCCCTTTATGGTCATCTCGAAAATCCCACCAAAGCCCCTCCTCTTCCTCTTCCTCCTCCGCTTCCTCCA


dot-bracket secondary structure
......(((..(((((((((((.(((((.(((.(((((((.(((.((......))..))))))))))......((((.((((((..((((((((.((((.
...))))......)))..))))).))).)))..........)))).)))..))))).)).))))))))).)))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM 7SK: 0.0007
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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