miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis



ABOUT THIS RECORD

ID: MNEST001985
species: Picea glauca
miRNA family: miR3710
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGGGAACCTGATGGGCCTCCA

miRNA*
GGGAACCTGACGGGCCTCCAA

mismatches: 3
bulges: 2

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pre-miRNA
GCTCCACTCTGCAGGCGCTCCCAGACTCCGTGGGGAACCTGACGGGCCTCCAAAGTCTCGACTTGCTCCGGTGCTCCACTCTGCAGGCACTCCCAGATTC
GGTGGGGAACCTGATGGGCCTCCAAAGTCTCTCCTTGAGCTACTGCTCCACTC


dot-bracket secondary structure
..........((((..((((..(((((...(((((..((((.((((.(((((.(((((.(((((((...((((...))))..)))))...))..))))).
..)))))..)))).)))).))))).)))))......))))..)))).......



SIMILARITIES
miRBase pab-MIR3710: 0.000000000000008

PMRD pta-miR1315: 0.0000000005

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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