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Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST039391
species: Picea abies
miRNA family: MIR951
source: miRBase, original name: pab-MIR951 (MI0016131)

Taxonomy by NCBI:
Picea abies Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTTCTTGACGTCTGGACCACG

miRNA*
CGGTCCAGTCGTCAAGAACACC

mismatches: 2
bulges: 0

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pre-miRNA
AGGAAGCGAAGGTGTTCTTGACGTCTGGACCACGTGGTTTGCTTTAAGATTTGCAGTAATATCCCATCAACTATCGCGGTCCAGTCGTCAAGAACACCTT
TGCTTTCA


dot-bracket secondary structure
.((((((((((((((((((((((.(((((((.((((((((((..........))).............))))).)).))))))).)))))))))))))))
))))))).



SIMILARITIES
miRBase pta-MIR951: 0.000000000006

PMRD pta-miR951: 0.000000000006

microPC miR951: 0.000005
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Yakovlev IA, Fossdal CG, Johnsen O, New Phytol. 187:1154-1169(2010)., "MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce"




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