miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST001989
species: Picea sitchensis
miRNA family: MIR2004
source: miRNEST

Taxonomy by NCBI:
Picea sitchensis Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGTTTTGATGTTATTTTGT

miRNA*
AAAGTATTTCTAAAAAAAAA

mismatches: 4
bulges: 1

View larger
pre-miRNA
TTATTTTTGTTTTTGTTTTGATGTTATTTTGTACCATCCTATAGGACTTGTGTCTCGGGCTTGTCACTAGAGACAAATATCGCACAATAAAGTATTTCTA
AAAAAAAA
AAAAAAAG


dot-bracket secondary structure
...(((((.(((((.(((.((...((((((((....(((....)))..(((((...((..(((((......)))))...)))))))))))))))..)).)
)).)))))
.)))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;