miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Pinus banksiana, Pinus banksiana, Pinus contorta, Pinus contorta, Pinus pinaster, Pinus pinaster, Pinus taeda, Pinus taeda



ABOUT THIS RECORD

ID: MNEST002019
species: Pinus banksiana
miRNA family: miR3636
source: miRNEST

Taxonomy by NCBI:
Pinus banksiana Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGTTGGCTTCTTTGATAGT

miRNA*
TACCAGGTAGCCAACTGCTA

mismatches: 4
bulges: 1

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pre-miRNA
CATGATTTATTTTACCAGGTAGCCAACTGCTATGTTGAAGCATTGTTCTGACTAGAATGCTTGGAAATCGGTTGGCTTCTTTGATAGTTAACGTTGT

dot-bracket secondary structure
......(((..(((.((((.(((((((((.....((.(((((((...........))))))).))...)))))))))..)))).))).)))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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