miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Pinus banksiana, Pinus banksiana, Pinus contorta, Pinus contorta, Pinus pinaster, Pinus pinaster, Pinus taeda, Pinus taeda



ABOUT THIS RECORD

ID: MNEST002032
species: Pinus pinaster
miRNA family: MIRf1255
source: miRNEST

Taxonomy by NCBI:
Pinus pinaster Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGTATGTACTTTTCTAGATC

miRNA*
TTGAGAAGTTACGTTGTTCA

mismatches: 4
bulges: 1

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pre-miRNA
AATTCGGCACGAGGTATGTACTTTTCTAGATCAAATTCCTGCAATCATTATCAAATTTGTTCTCAATTCACTCTTCTATTTTGTTTAATTTGGAAGATAT
TAGAGAGCAGGAAGATTGAGAAGTTACGTTGTTCATGTATTTA


dot-bracket secondary structure
......(((.(((..(((((..(((((.((((...(((((((..................(((((((....(((((((..((....))..))))))).))
).))))))))))))))).))))).)))))..))).))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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