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Species belonging to selected taxon:

Pisum sativum



ABOUT THIS RECORD

ID: MNEST002073
species: Pisum sativum
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Pisum sativum Pisum Fabeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTACGGGAAGCCAGGCATA

mismatches: 1
bulges: 0

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pre-miRNA
CATGAGTATGTGCCTGGCTCCCTGTATGCCATATACGAAGCTTATTGAAATATCAATAACCTTTGTGGATGGCGTACGGGAAGCCAGGCATATTCCATT

dot-bracket secondary structure
.(((...((((((((((((.((((((((((((.(((((((.(((((((....))))))).))))))).)))))))))))).))))))))))))..))).


SIMILARITIES
miRBase mtr-MIR160e: 2e-27

PMRD mtr-miR160e: 2e-27

microPC miR160: 0.00000008
UniProt no hits

RFAM mir-160: 3e-23
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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