miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Hippoglossus hippoglossus, Paralichthys olivaceus, Psetta maxima, Solea senegalensis, Cynoglossus semilaevis



ABOUT THIS RECORD

ID: MNEST009867
species: Solea senegalensis
miRNA family: mir-8
source: miRNEST

Taxonomy by NCBI:
Solea senegalensis Solea Soleidae Soleoidei Pleuronectiformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAATACTGTCTGGTAATGCCG

miRNA*
TCTTACCAGACATGGTTAGA

mismatches: 3
bulges: 1

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pre-miRNA
CCTTCCAGCCTGTTGATAGGCGTCTTACCAGACATGGTTAGATGTAATTATTGGTGTCTAATACTGTCTGGTAATGCCGTCCATTGAATGGCATTACC

dot-bracket secondary structure
.......(((..(((((.(((((.((((((((((..(((((((............)))))))..)))))))))).).)))).)))))..)))......


SIMILARITIES
miRBase tni-mir-429: 2e-39

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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