miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Hippoglossus hippoglossus, Paralichthys olivaceus, Psetta maxima



ABOUT THIS RECORD

ID: MNEST009580
species: Hippoglossus hippoglossus
miRNA family: mir-147
source: miRNEST

Taxonomy by NCBI:
Hippoglossus hippoglossus Hippoglossus Pleuronectinae Pleuronectidae Pleuronectoidei Pleuronectiformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGTGCGGAAACGCTTCTGCT

miRNA*
CAGAATCCTTTCTGCACAAAC

mismatches: 5
bulges: 0

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pre-miRNA
ATGCCCCCTCCCATCAGTCGAACAGAATCCTTTCTGCACAAACTAGGATGCTTTGTCACTCAGTGTGCGGAAACGCTTCTGCTCCACTGGTGGGGGTTCA
CC


dot-bracket secondary structure
.......(((((((((((.((.(((((...((((((((((......(((.....)))......))))))))))...))))).)).)))))))))))....
..



SIMILARITIES
miRBase gga-mir-147-1: 0.0003

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-147: 4e-25
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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