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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Cynodon dactylon
,
Eragrostis curvula
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Panicum virgatum
,
Pseudoroegneria spicata
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Cenchrus ciliaris
,
Brachypodium distachyon
,
Zea mays
,
Triticum aestivum
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST000989
species:
Hordeum vulgare
miRNA family:
MIR2033
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATTTCTTTACAAAGGGAGTA
miRNA*
TTCCTTCCGTGAGNAAATATA
mismatches:
3
bulges:
0
View larger
pre-miRNA
GGTTTGCAGNATA
TTCCTTCCGTGAGNAAATATA
AGNAGCATTTAGNATCATGATCTAAATTACTGATCCAAACGCTTTTG
TATTTCTTTACAAAGGGAG
TA
CAAGTTACAG
dot-bracket secondary structure
...........((
((((((..(((((.(((((((
(..(((.(((...((((((((....)))).))))..))).))).)))
))))).)))))..))))))
))
..........
SIMILARITIES
miRBase
no hits
PMRD
ave-miR1120
:
0.000005
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.0001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record