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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Cynodon dactylon
,
Eragrostis curvula
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Panicum virgatum
,
Pseudoroegneria spicata
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Cenchrus ciliaris
,
Brachypodium distachyon
,
Zea mays
,
Triticum aestivum
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST001777
species:
Panicum virgatum
miRNA family:
miR167g
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTCATGCTGTAGTTTCATCT
miRNA*
GTGAAGCTGCCAGCATGATCTG
mismatches:
1
bulges:
1
View larger
pre-miRNA
GGTAGCGGTGCTCCACAAGTTG
GTGAAGCTGCCAGCATGATCTG
ATGGTATGATATGCTTTTACCTCGATCTCCTCCTGATCGCCGAGGACGAATTCAGG
ATAGGGGAAAGAGGAATAATAAGCGTCA
GGTCATGCTGTAGTTTCATCT
GCTGGTGGGTGCACAACGA
dot-bracket secondary structure
.......(((((((((.(((.(
((((((((((.(((((((((((
(..........(((((...((((..((((((((((((((.......)))..)))))
)..)))))..))))......))))))))
)))))))))))))))))))).
))).))))).)))).....
SIMILARITIES
miRBase
sbi-MIR167e
:
4e-17
PMRD
sof-miR167b
:
4e-17
microPC
miR167
:
0.000000009
UniProt
no hits
RFAM
MIR167_1: 0.00000000000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record