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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST045131
species: Saccharum officinarum
miRNA family: MIR444
source: microPC, original name: miR444

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTTGTCTCAAGCTTGCTGCC

miRNA*
 TGACAAGCTAGAGGCAGCAAC

mismatches: 3
bulges: 0
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pre-miRNA
 GGTGACAAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGGTTTTCGAACCATACCGATAATTTTCTTGCANGTTGTGCAGTTGTTGTCTCAAGC
TTGCTGCC

dot-bracket secondary structure
(((..((((((.(((((((((((((((((...(((((((((((((....(((........))))))))))))))))...))))))))))))))))).)))
)))..)))


SIMILARITIES
miRBase ssp-MIR444c: 6e-55

PMRD pvi-miR444: 2e-45

microPC miR444: 1e-52		UniProt no hits

RFAM MIR444: 3e-51

MORE

miRNEST target predictions
non-miRNEST targets: none
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