miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008452
species: Sorghum bicolor
miRNA family: MIR812
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGAATAAGACGAGTGGTCAA

miRNA*
GACCACTCGTCTTATTCAAAG

mismatches: 0
bulges: 0

View larger
pre-miRNA
TTTTTTAATATCAAGTTTGACCACTCGTCTTATTCAAAGTTTTGTACAAAATATCACTTTTTTTTGTTGTGTATTGGTTTATTAATAAAAATTCTTCAAG
AATGACTTAAAATTTGACTATATTTGCACAAATTTTTTGAATAAGACGAGTGGTCAAACTTGAGGTAAAAAAGTCA


dot-bracket secondary structure
(((((((...(((((((((((((((((((((((((((((.(((((.((((((((((..((((...(((((...((((...(((......)))...)))).
.)))))..))))..))).))).)))).)))))..)))))))))))))))))))))))))))))..)))))))....



SIMILARITIES
miRBase osa-MIR818e: 0.00000000001

PMRD osa-miRf10207-akr: 0.00000000001

microPC miR806: 0.0000001
UniProt no hits

RFAM MIR812: 3e-64
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;