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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003684
species: Zea mays
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTCTTCCTCTTCCTCTTCCT

miRNA*
 GACGAGGAGCAGGAAGAGCTC

mismatches: 4
bulges: 0
View larger
pre-miRNA
 CTAGGCAGGCTAGCTTCGCATGGATTCACCCGCGGCTGCGTCGTCGCTGCTCCTGGACCACTCGTGCCGCCGCTCTTCCTCTTCCTCTTCCTCCGCCGCC
TGATGGTGATGGCCAGCGCCGGCGTCAACGTGCCCGGCGGCGACGAGGTACGGAACCCGACCGCTGCGTCCGCGTCCACCCCAGAATGCCGGATGCGCAG
GCGCCACCGCCTCGAGCCCCAAGGATCCGGCGACGCCGCCGCCGCTGCGGCGCCGGGCCCGAGCTGGGTGCGCCGTCTCCGTCCTGCGGCCTCCCGGTTC
TCGCCGTCGCCGTCGCCATCGCTGTCGCCGTCGTCGTCCCAGAGCTCTGCGGACAGGCCCAACGACGAGGAGCAGGAAGAGCTCGACCATGAGGTGGAGG
TGGAGCTCGCGCCGGCGGGGCCGCAGCTCGAGCCCGGCGAGGCTGAAGGTGA

dot-bracket secondary structure
....((....(((((((((.(((.(((....((((((.(((((.(((.(((((....(((((((((.((..(((((((((.((((((.((....(((...
(((((((((((((..(((.(((((...(((.((..((.(((..((((((..((....((.((..(((((((((((..........))).))))))))..)
)))...)))))))).)))))..((.(((((((.(((.((....)).))).))))))).))((((((((...(((((.........)))))..))))))))
..)))))))))).)))....)))))))))))))..(((((((....))).)))).))).....)).)))))).))))))))).))..))))).))))...
.)))))..))).))))).)))))).....))).))))))))))))...))..


SIMILARITIES
miRBase mtr-MIR2673b: 0.00009

PMRD no hits

microPC no hits		UniProt no hits

RFAM SSU_rRNA_eukarya: 0.000002		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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