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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003729
species: Zea mays
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAAGGAGACTGCCTACG

miRNA*
 TAGGCAAGTCATCCTTGGCTATC

mismatches: 2
bulges: 2
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pre-miRNA
 TCTCGATTGAGCCTAGCATGAGCAATAGGGGCCACTCAGGCTAGCCAAGGAGACTGCCTACGAACCAACACAAAGGTCCACAATTCTGATCCTTTGTAAA
CAAAGGACATAGGCAAGTCATCCTTGGCTATCAGAGGCAGGCCCTTATTGACATGTAAGGCTTCTGCTCT

dot-bracket secondary structure
........((((((.(((((..(((((((((((.(((.((.(((((((((((((((((((....((...(((((((..((......))..)))))))...
....))...))))).)))).)))))))))))).)))...))))))))))).))))).)))))).......


SIMILARITIES
miRBase zma-MIR169h: 2e-68

PMRD zma-miR169h: 2e-68

microPC miR169: 0.000000009		UniProt no hits

RFAM MIR169_5: 6e-44		most similar mature miRNAs

Identical with: zma-MIR169h from miRBase (MNEST042750)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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