ABOUT THIS RECORDspecies: Caligus rogercresseyi
miRNA family: mir-1207
source: miRNEST
Taxonomy by NCBI:
Caligus rogercresseyi Caligus Caligidae Siphonostomatoida Podoplea Neocopepoda Copepoda Maxillopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGGAGGGAGGGAGGGAGGGG miRNA* CCGCCTTCCCCCCTTGGGCC mismatches: 4 bulges: 1 |
pre-miRNA
TCCCCCGCCTTCCCCCCTTGGGCCCTGGGAGGGAGGGAGGGAGGGGG
dot-bracket secondary structure
.(((((.((((((((((((.........))))).))))))).)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCCCCCGCCTTCCCCCCTTGGGCCCTGGGAGGGAGGGAGGGAGGGGG
dot-bracket secondary structure
.(((((.((((((((((((.........))))).))))))).)))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
