miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000195
species: Avena sativa
miRNA family: MIRf160
source: miRNEST

Taxonomy by NCBI:
Avena sativa Avena Aveninae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGCAGCAGCAGAAGCAGCAG

miRNA*
GTCGTTTCTACTTGTACAG

mismatches: 2
bulges: 2

View larger
pre-miRNA
ATAAGTCTGTCTGTCGTTTCTACTTGTACAGTAAGGTTACTTGTCCTGTGGTGCAGCAGCAGAAGCAGCAGTAGCGAAGT

dot-bracket secondary structure
....(.(((.((((.((((((.(((((((....(((........)))...)))))..)).)))))).)))))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;