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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST003064
species: Brachypodium distachyon
miRNA family: MIR1132
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATCATGGAACGGAGGGAGTA

miRNA*
 CTCCCTCCGTTCCATAATATA

mismatches: 2
bulges: 0
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pre-miRNA
 GTTATACACTCCCTCCGTTCCATAATATAAGGCACGCACGCATTTCAAAATTTTGGTTTGACCACCAATTAGACCAACAAAATATGAATTATGTATTATA
AAAATTATACCATCCGAAACTTCTTTTAATATGAATCTACTGGTATAATTTGTATACCACATAATTCACATTTTTTTAGTCTAATTGGTGGTCAAAGTTG
GATCTCGAAATGCGTGGACACCTTATATCATGGAACGGAGGGAGTATATTG

dot-bracket secondary structure
...(((.((((((((((((((((.((((((((....((((((((((...((((...((((((((((((((((((.((.(((((.((((((((((..((((
.(((((((((((...((...(((.........)))))...))))))))))).))))..)))))))))).))))).)).))))))))))))))))))...)
)))...))))))))))....)))))))).)))))))))))))))).)))..


SIMILARITIES
miRBase osa-MIR818d: 0.0002

PMRD bdi-miR2507b: 0.00000000001

microPC miR1436: 0.000003		UniProt no hits

RFAM MIR806: 0.00002		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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